Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  143 bits (360), Expect = 1e-38
 Identities = 120/424 (28%), Positives = 189/424 (44%), Gaps = 35/424 (8%)

Query: 45  GFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDT--HSRENWVQGTILNYSSGFT 102
           G + G  L    +  + ++  A   L  YY N   R D     RE W QG ILN  SGFT
Sbjct: 14  GLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFT 73

Query: 103 QGTVGFAVEAAGYNAIALQQSREAI-AGPNNRTLTHSDGDPV------GQWSKLGLGNIK 155
           +GTVGF V+  G   + L  S +   +G  +R    + G P        ++SK G+   K
Sbjct: 74  EGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYSKYGVTG-K 132

Query: 156 ARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRT- 214
            R + + L  G    D P +    +R  P +F+G  + S +   L++  G  D+   R  
Sbjct: 133 VRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRES 192

Query: 215 ----EQSLSKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGANH 270
               +  L+     Y +T  ++DR   AG +Y+    ++ S +  ++ED + Q++ G  +
Sbjct: 193 TEYEDMGLTSQSGAYKSTA-KSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLKN 251

Query: 271 --VLGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGN 328
              LG     +L T + Y+    +G+   GK+DN   S     +++ H+L   +Q+  G+
Sbjct: 252 SFALGGG---TLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQYGD 308

Query: 329 EYFDYLHETNGIFLANSLLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDG 388
             F Y+  TN    +   LS+F+  NE+     Y  + A  GVPGL F+   A       
Sbjct: 309 TPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWA------- 361

Query: 389 THYRGTAYDVNGLDGE-THYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDE 447
              +G    V G  GE   +E  I   Y  QSG LK  S+R     +  SKA     ++E
Sbjct: 362 ---KGDQAQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLR---WRNGLSKANYLRDMNE 415

Query: 448 FRVV 451
            RV+
Sbjct: 416 NRVI 419