Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 2e-38
 Identities = 124/427 (29%), Positives = 204/427 (47%), Gaps = 42/427 (9%)

Query: 41  AQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTILNYSSG 100
           A+  GF++  S + + RN++             Y N  T+    ++E W Q  IL+  SG
Sbjct: 24  AEEHGFLEDASANLNLRNFFFNRN---------YTNP-TKAQGGAQE-WTQSFILDAKSG 72

Query: 101 FTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVGQWSKLGLGNIKARVSN 160
           FTQGTVGF V+  G  ++ L   R    G     L H DG P  ++ +LG+   KAR+S 
Sbjct: 73  FTQGTVGFGVDVLGLYSLKLDGGR-GTGGTQLLPLDH-DGRPADEFGRLGVA-FKARISK 129

Query: 161 TTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSLSK 220
           T + +G      P++     R+LP + +G  + S E D L++  G F   SPR + S++ 
Sbjct: 130 TEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDSSMND 189

Query: 221 FRSEYSATGVETDRASTAGINYQ-PFKSLSTSLYATKVEDFWNQYYFGANH--VLGDSAV 277
             S +  T   +DR +  G  Y    K     L+  +++D ++Q +    H   LG+   
Sbjct: 190 L-SMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGN--- 245

Query: 278 LSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYLHET 337
            +L   L ++   D GS + G++DN T+S      +  +T     Q++ GN  +  ++ T
Sbjct: 246 WTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGT 305

Query: 338 NGIFLAN-SLLSDFNGPNEKSLQLSYVLNMAPYGVPGLK-FNLYNARGWGIDGTH-YRGT 394
           +G  LAN S  + ++   EKS Q+ +  N A  GVPGL   N Y      I G++ + GT
Sbjct: 306 SGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRY------ISGSNVHTGT 359

Query: 395 AYDVNGLDGETHYEWGIGT--SYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVVT 452
             D          EWG  +   Y +QSG LK+ ++R   ++ R  +   +   DE R++ 
Sbjct: 360 VTDGK--------EWGRESELGYTVQSGSLKNLTVRLRNSSMR--RDYSNNEFDENRLIV 409

Query: 453 TIPFNIL 459
           + P ++L
Sbjct: 410 SYPISLL 416