Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  181 bits (460), Expect = 3e-50
 Identities = 137/437 (31%), Positives = 201/437 (45%), Gaps = 34/437 (7%)

Query: 32  LTLKSSSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQ 91
           L L  +   AQA+GF++  S     RN Y                  +      RE W Q
Sbjct: 20  LFLLCAGVNAQAAGFLEDASAKIEARNVYFNRDFRDG-------YSSSSQGASKREEWAQ 72

Query: 92  GTILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDP---VGQWSK 148
           G ILN  SG+TQG VG  V+A G     L  S    A  N+  L  S  DP     Q++K
Sbjct: 73  GFILNVQSGYTQGPVGVGVDALGMFGFKLDSSP---ADSNSGLLPSSGHDPRRSADQYAK 129

Query: 149 LGLGNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFD 208
           +GL   K +VSNT L  G    D P++ Y   R LP+ F GA L S E  +L   L   D
Sbjct: 130 MGLA-AKVKVSNTVLKYGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHDLKFTLARLD 188

Query: 209 RVSPRTEQSLSKFR----SEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQY 264
           + + R        R    ++  A   E D    AG++Y+  +  S      K+E+ + Q+
Sbjct: 189 KYTARDSTDRQDIRVHCKNKRYACDTEADHFDLAGVDYRFNERFSAQYQVAKLENIYRQH 248

Query: 265 YFG--ANHVLGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASW 322
           + G  A+  L    V SLS  +   K+ D G+ + G+ID+  +S  LG +   H LSA W
Sbjct: 249 FLGLVASQPL---PVGSLSADMRLIKSDDIGNARAGEIDHRAFSGMLGYSLGGHKLSAGW 305

Query: 323 QQVNGNEYFDYLHETNGIFLANSLLSDFNGPNEKSLQLSYVLNMAPYGVPGLK-FNLYNA 381
           Q++ GN    YL  +N   +  + ++DF    E+S Q+ Y  +    GVPGL  F  Y  
Sbjct: 306 QRMYGNSAMPYLDGSNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFTRY-- 363

Query: 382 RGWGIDGTHYRGTAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQG 441
               I+G + +     V G + E   E+     Y +QSG  KD S+R   +T+R++  + 
Sbjct: 364 ----INGDNIKVPGSSVEGKEWERDTEF----KYQVQSGTFKDVSVRLRNSTYRSNYERW 415

Query: 442 DGSLDEFRVVTTIPFNI 458
              +DE RV+ +  F+I
Sbjct: 416 ARDMDETRVIVSYNFSI 432