Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 2e-41
 Identities = 125/425 (29%), Positives = 198/425 (46%), Gaps = 41/425 (9%)

Query: 41  AQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTILNYSSG 100
           AQ  GF++      + RN+Y           + +++ G        E W QG I  +SSG
Sbjct: 27  AQEGGFLEDAKGGLTLRNYYFN---------RDFRDPGAAKG--KVEEWAQGFIFKFSSG 75

Query: 101 FTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTL--THSDGDPVGQWSKLGLGNIKARV 158
           +T G +GF ++      + L        G +   L   H DG     + + GL   K R+
Sbjct: 76  YTPGLIGFGLDGIALFGVKLDSG----GGTSGSELLPVHDDGRAADDYGRAGLA-AKLRM 130

Query: 159 SNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSL 218
           S T L +G    D P++ Y   R LP +F+GA L S E + LS+  G +  VS R    +
Sbjct: 131 SATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDM 190

Query: 219 SKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYA--TKVEDFWNQYYFGANHV--LGD 274
               S ++A GV +D  + AG  Y+ F    T + A  +++ED + Q YF   H   +G+
Sbjct: 191 QDL-SAWAAPGVTSDGFNYAGAEYR-FNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGE 248

Query: 275 SAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYL 334
               +L   L Y+   D G  ++G I + T    L  +H  HTL    Q+V+G+  +  +
Sbjct: 249 ---WTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSV 305

Query: 335 HETNGIFLANSLLS-DFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRG 393
           + ++G  L N + + +F+  +E+S Q+ Y  N A  GVPGL   +    G G + T    
Sbjct: 306 YGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMV--RYGHGENAT---- 359

Query: 394 TAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVVTT 453
           TA   NG + E   E     +Y  QSG LK+ +IR    T+R S    +  LD+ R++ +
Sbjct: 360 TAAGSNGKEWERDAE----VNYTFQSGALKNLNIRLNNATNRRS---FNSDLDQTRLIVS 412

Query: 454 IPFNI 458
            P  +
Sbjct: 413 YPLTL 417