Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 2e-62
 Identities = 147/429 (34%), Positives = 222/429 (51%), Gaps = 16/429 (3%)

Query: 40  QAQASGFIDGQSLSGSTRNWYARE--RAARAPLWKYYKNDGTRHDTHSRENWVQGTILNY 97
           +  A GF++G +LS   RN+Y     R + AP      N   + D    E W    I  +
Sbjct: 26  EKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPT----HNPSKQADNGYSEAWGHAVITRF 81

Query: 98  SSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTL--THSDGDPVGQWSKLGLGNIK 155
            SGFTQGTVG  ++A     + L        G ++  +     DG    +++K+G G  K
Sbjct: 82  ESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDGQARDEYTKVG-GAAK 140

Query: 156 ARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTE 215
            R+ +T L +G      P++A   +R LP SF+G  L ++   +L++  G    +S    
Sbjct: 141 LRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDLTLQAGRLHAMSQPMS 200

Query: 216 QSLSKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGANHVLGDS 275
             L +    +    V++   +  G +Y+  + +S SL++++++D WNQYY G +     S
Sbjct: 201 SDLRENFVTFYGGPVDSPWIAYGGGDYRLNEHVSVSLFSSRLKDAWNQYYAGTSLSWPLS 260

Query: 276 AVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYLH 335
             L+L  G NYYK VD G Q++G  DND +S  LG+   AHTL+ + Q+ NG++ FDYL 
Sbjct: 261 EALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFGAHTLALTHQRNNGDDDFDYLR 320

Query: 336 ETNGIFLANSL-LSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRGT 394
           +++ IFL NS+  SDFN P E+S  L Y LNMA YGVPGL F     +G   D ++   T
Sbjct: 321 QSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSFMTRYGKGNDADYSNANAT 380

Query: 395 --AYDV--NGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRV 450
               DV  N L  +  +E  I   Y +Q+G  KD S+R    T RA+  + D  LDE R+
Sbjct: 381 YMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQATTRATAFESD--LDEVRM 438

Query: 451 VTTIPFNIL 459
           +   P +IL
Sbjct: 439 IVEYPLSIL 447