Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 6e-39
 Identities = 114/383 (29%), Positives = 176/383 (45%), Gaps = 25/383 (6%)

Query: 86  RENWVQGTILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVGQ 145
           R  W QG +L   SG+T G VGF ++AAG   + L  S +     +      SD      
Sbjct: 55  RGEWAQGFMLRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDRSG--SGLLPRGSDKRAADD 112

Query: 146 WSKLGLGNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLG 205
           ++K  +   KAR++ + L  G  S   P++A   +R  P  F G  L S + D  +  L 
Sbjct: 113 YAK-AVATFKARLAQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLL 171

Query: 206 TFDRVSPRTEQSLSKF-----RSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDF 260
             D    R             +  YSAT V +DR   AG++YQP  +L+ SL+ + +ED 
Sbjct: 172 QVDATKLRDSTDYEDLTAMAQQGAYSAT-VTSDRLRYAGVDYQPLNNLTLSLHTSVLEDL 230

Query: 261 WNQYYFGANHV--LGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTL 318
           + + + G      LG   V    T   ++   + G   +G +DN T S + G + Q HT 
Sbjct: 231 FRRDFAGFKFKTRLGPGDVF---TEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTF 287

Query: 319 SASWQQVNGNEYFDYLHETNGIFLANSLLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNL 378
           S  +Q+V G+  + Y+  T+    +   +S F   NE++  L Y  N A  G+PGL FN+
Sbjct: 288 SGGYQKVRGDTAYAYVGGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNV 347

Query: 379 YNARGWGIDG---THYRGTAYDVNGLDGETHYEWGIGT--SYALQSGPLKDTSIRATYTT 433
              +G  +D       +G A      DGE   EW   T  +Y +QSG L++ S+R    +
Sbjct: 348 RYVKGDQVDPQRIASVKGRALAAG--DGEGR-EWERTTDITYVVQSGALRNVSLRWRNAS 404

Query: 434 HRASKAQGDGSLDEFRVVTTIPF 456
            R++ A    + DE RV+    F
Sbjct: 405 MRSNFAD---AADENRVIVGYTF 424