Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 3e-41
 Identities = 117/395 (29%), Positives = 178/395 (45%), Gaps = 32/395 (8%)

Query: 66  ARAPLWKYYKNDGTRHDTHSR---ENWVQGTILNYSSGFTQGTVGFAVEAAGYNAIALQQ 122
           AR  L  +Y N   R     +   E W QG      SGFT+G VGF V+A G   I L  
Sbjct: 38  ARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPVGFGVDALGQLGIKLDS 97

Query: 123 SREAIA------GPNNRTLTHSDGDPVGQWSKLGLGNIKARVSNTTLTLGRQSVDTPMIA 176
           SR+         GPN+        +PV  +S+LGL   K RVS +TL LG      P++ 
Sbjct: 98  SRDRRNTGLLPFGPNSH-------EPVDDYSELGLTG-KVRVSKSTLRLGTLQPILPVVV 149

Query: 177 YIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSLSKFRSEYSATGVETDRAS 236
           Y   R L SSFQG  L S + D L+ + G   + + R     S  R +       +D   
Sbjct: 150 YNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRD----SSGRDDIGYGAASSDHLD 205

Query: 237 TAGINYQPFKSLSTSLYATKVEDFWNQYYFGANHVLGDSAVLSLSTGLNYYKTVDAGSQK 296
             G +Y      + S Y  K++D + Q + G       +  +SL + L Y+ + + G+++
Sbjct: 206 FGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSRNDGAER 265

Query: 297 MGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYLHETNGIFLANSLLSDFNGPNEK 356
            G IDN  ++    L  +AH  +A+WQQ++G+  F +++  +   +     + F      
Sbjct: 266 AGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVNLVTYNTFTRAGLD 325

Query: 357 SLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRGTAYDVNGLDGETHYEWGIGTSYA 416
           S Q+ Y  +    G+PGL F          DG H   TA   NG + E   +     +Y 
Sbjct: 326 SWQVRYDYDFVAMGIPGLSFMTRYT-----DGRHAE-TATVTNGRERERDTD----ITYV 375

Query: 417 LQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVV 451
           +QSGP KD S+R    T R+       ++DE R++
Sbjct: 376 IQSGPFKDVSLRWRNVTFRSGNGL-TNAVDENRLI 409