Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 2e-36
 Identities = 120/426 (28%), Positives = 189/426 (44%), Gaps = 43/426 (10%)

Query: 40  QAQASGFIDGQSLSGSTRNWYA-RERAARAPLWKYYKNDGTRHDTHSRENWVQGTILNYS 98
           QA A GF+D    S + RN+Y  R+    A   K              E W Q  I ++ 
Sbjct: 22  QALAEGFVDDAKASLTLRNFYMNRDYTGTASQGK-------------AEEWTQSFIFDFK 68

Query: 99  SGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVGQWSKLGLGNIKARV 158
           SG+T G VGF V+  G  +I L   +   AG     + H DG P   + +  L   K RV
Sbjct: 69  SGYTPGVVGFGVDVLGLYSIKLDGGK-GTAGTQLLPV-HDDGRPADDFGRTALAG-KMRV 125

Query: 159 SNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSL 218
           S T L +G  S   P++     R+LP + QGA + S E   LS+  G F + SPR + S+
Sbjct: 126 SRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASM 185

Query: 219 SKFRSEYSATGVETDRASTAGINYQ--PFKSLSTSLYATKVEDFWNQYYFGANH--VLGD 274
               S ++ T   +DR + AG  Y+    ++L  + YA ++ED + Q YF   H   LG+
Sbjct: 186 QDM-SLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYA-QLEDIYQQRYFQVQHQQPLGN 243

Query: 275 SAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYL 334
                L   L Y+   D G  K G+++N T S         +T     Q+V G++ +  +
Sbjct: 244 WV---LGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMGDDEWFRV 300

Query: 335 HETNGIFLANSLL-SDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRG 393
           +  +G  LAN    S +    E+S Q+ +  N    G+PGL        G+ +     +G
Sbjct: 301 NGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNVHNASTQG 360

Query: 394 TAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVVTT 453
              ++               +Y +QSGP K  +++   ++ R        S DE R++ +
Sbjct: 361 RESEL---------------AYVVQSGPFKALNLKWRNSSQRRDWG-STNSFDENRLIVS 404

Query: 454 IPFNIL 459
            P ++L
Sbjct: 405 YPLSLL 410