Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 3e-44
 Identities = 126/414 (30%), Positives = 183/414 (44%), Gaps = 39/414 (9%)

Query: 41  AQASGFIDGQSLSGSTRNWYARER-------AARAPLWKYYKNDGTRHDTHSRENWVQGT 93
           A A+GFI+   L    RN Y  E        +ARA                 R  W QG 
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATA----------KSERVEWAQGF 70

Query: 94  ILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTL--THSDGDPVGQWSKLGL 151
           +L+Y SGFTQGT+G  V+A G   + L   R    G +   L   H DG    +++  G+
Sbjct: 71  LLDYQSGFTQGTLGLGVDAMGLLGVRLDSGR----GRSGTGLLPVHDDGRAADEFASAGI 126

Query: 152 GNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVS 211
              KAR+ +T +  G     TP++ Y   R LP ++QG  L S + DNL++  G  DR  
Sbjct: 127 -TAKARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFK 185

Query: 212 PR-TEQSLSKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGANH 270
            R +  S   +   Y   G  +   S AG +Y   K L  S +  ++E F+ Q + G  H
Sbjct: 186 QRDSSDSTGLYLDGYG--GPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVH 243

Query: 271 VLGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEY 330
            L     + L+T L Y+K+ D+G+   G IDND +S  L   H  HT+ A +Q ++G   
Sbjct: 244 DLPLGGGV-LTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAG 302

Query: 331 FDYLHETNGIFLANSLLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTH 390
             Y+        +N  +  F    EK+   SY  N A  GVPGL F            T 
Sbjct: 303 LPYISGATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFM-----------TR 351

Query: 391 YRGTAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGS 444
           Y       +G +G   +E     +Y +Q GPLK   ++     +R+  A+G  S
Sbjct: 352 YLSGDNGRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGRDS 405