Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 8e-43
 Identities = 124/425 (29%), Positives = 192/425 (45%), Gaps = 38/425 (8%)

Query: 41  AQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTILNYSSG 100
           A   GFI+    + + RN+Y                    H     E W Q  IL+  SG
Sbjct: 26  ANEGGFIEDAKATLNLRNFYINRNFV-----------DPAHPQGKAEEWTQSFILDARSG 74

Query: 101 FTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTL--THSDGDPVGQWSKLGLGNIKARV 158
           FTQGTVGF V+  G  ++ L   +    G  N  L   H DG P   + +LG+  +KA++
Sbjct: 75  FTQGTVGFGVDVLGLYSVKLDGGK----GTTNTHLLPVHGDGRPADDFGRLGVA-LKAKL 129

Query: 159 SNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSL 218
           S T L +G      P++     R+LP +F+G  L S E   L++  G F   SPR + S+
Sbjct: 130 SETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSPRNDASM 189

Query: 219 SKFRSEYSATGVETDRASTAGINYQ-PFKSLSTSLYATKVEDFWNQYYFGANHV--LGDS 275
                   A    +DR +  G  Y    K     L+  +++D + Q Y    H   LGD 
Sbjct: 190 EDMSLNGKAA-FTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHSQPLGD- 247

Query: 276 AVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYLH 335
              +L   L Y+   + G+++ GK+DN T S  L   +Q HT     Q+V+G++ +  ++
Sbjct: 248 --WTLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQKVSGDDAWMRVN 305

Query: 336 ETNGIFLAN-SLLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRGT 394
            T+G  LAN S  S F+   E+S Q+ +  N A  GVPGL           +   + +G 
Sbjct: 306 GTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLT----------LMNRYIKGD 355

Query: 395 AYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVVTTI 454
              V  +D    +      +Y +QSG  KD S++   +T R  +     + DE R++ + 
Sbjct: 356 NVTVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMR--RDFSTNAFDENRLIVSY 413

Query: 455 PFNIL 459
           P N+L
Sbjct: 414 PLNLL 418