Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  196 bits (497), Expect = 2e-54
 Identities = 131/438 (29%), Positives = 213/438 (48%), Gaps = 31/438 (7%)

Query: 36  SSSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTIL 95
           + +++ +A GFI+G S +   RN              Y+  D           W QG + 
Sbjct: 22  AQADEDKADGFIEGSSFNLHFRN-------------AYFNRDNHNAGVRDTREWGQGAVA 68

Query: 96  NYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVG----QWSKLGL 151
            + SG+T G VGF ++A     + L       AG +       D   +G     +S  G 
Sbjct: 69  RFESGYTPGVVGFGLDAHAMLGLKLDGGG-GHAGTSILPEHIKDDGELGAAPHSFSTAGA 127

Query: 152 GNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVS 211
             +K +  +T L  G   +  P+IA    R LP +F+G  L +   D L ++ G      
Sbjct: 128 A-VKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTH 186

Query: 212 PRTEQSLSKFRSEYSATGVETDRA---STAGINYQPFKSLSTSLYATKVEDFWNQYYFGA 268
           P  +    +  + Y +   E D++   + AG ++   + ++ +LYA +++D WNQYY   
Sbjct: 187 PYNQSGHRRIDTYYGSLD-EHDKSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADF 245

Query: 269 NHVLGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGN 328
           ++    + ++SL+ G+++Y T D G   +GKIDN+TYS+   +    H+++A++Q+VNGN
Sbjct: 246 DYTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGN 305

Query: 329 EYFDYLHETNGIFLANS-LLSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWG-I 386
             FDY++  + ++L NS + SDFN PNE+S +L Y  + A  GVPGL  +L  +RG   +
Sbjct: 306 TPFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADL 365

Query: 387 DGTHYRGTAYDVNGLDGET--HYEWGIGTSYALQSGPLKDTSIRATYTTHRASKA----Q 440
                  T YD    DG+   H+E  +   Y  Q G LKD S+   Y THR S+      
Sbjct: 366 TKATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASID 425

Query: 441 GDGSLDEFRVVTTIPFNI 458
            +   DE RV+   P N+
Sbjct: 426 SNSDNDELRVIVDYPLNV 443