Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  147 bits (372), Expect = 5e-40
 Identities = 135/471 (28%), Positives = 199/471 (42%), Gaps = 75/471 (15%)

Query: 30  LPLTLKSSSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENW 89
           L + L   ++QA A+GF++   LS S+R  Y               ND  R     ++  
Sbjct: 8   LAVALGVLAQQAGAAGFVEDSKLSLSSRTMYF--------------NDDNRESGIDQKES 53

Query: 90  VQGTILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTL-THSDGDPVGQWSK 148
            QG  L+Y SGFTQGTVGF V+      I L   R +    NN    + SDG  V  W++
Sbjct: 54  GQGFKLDYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWAR 113

Query: 149 LGLGNIKARVSNTTLTLGRQSVD-TPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTF 207
           +G GN KAR S T +  G       P++     R LP +F+G  L S E DNL+I+ G  
Sbjct: 114 IG-GNAKARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQL 172

Query: 208 DRVSPRTEQSLSKFRSEYSATGV--ETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYY 265
                R     S  R+  S +G   ++++   AG +Y+    L+   Y + +EDF+ Q++
Sbjct: 173 THAMGRA----SSNRTGLSVSGAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHF 228

Query: 266 FGANHVLGDSAVLSLSTGLNYYKTVDAG---------------SQKMGKIDNDTYSLSLG 310
            GA HV   +   S  T L Y+ +   G               ++  G++DN T+S    
Sbjct: 229 LGATHVFKIADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFT 288

Query: 311 LTHQAHTLSASWQQVNGNEYFDYLH-------------ETNG----IFLANSLLSDFNGP 353
            T   H L    QQV  +  F +L+             E NG        +S+++ F   
Sbjct: 289 YTLGGHALMLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARA 348

Query: 354 NEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRGTAYDVNGLDGE-THYEW--G 410
            E +    Y  + A  GVPGLK ++   RG             DV    G+ T+ EW   
Sbjct: 349 GENTTFGQYSYDFAALGVPGLKASVSYLRG------------DDVRNRSGDGTYNEWERD 396

Query: 411 IGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSL--DEFRVVTTIPFNIL 459
               Y LQ G LK          +R S   G+ +L  D+ R +    +N L
Sbjct: 397 ARVDYTLQEGTLKGLGFSLRQGVYRGS---GESALDKDQTRFIVNYTYNFL 444