Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 2e-65
 Identities = 148/433 (34%), Positives = 228/433 (52%), Gaps = 16/433 (3%)

Query: 36  SSSEQAQASGFIDGQSLSGSTRNWYARE--RAARAPLWKYYKNDGTRHDTHSRENWVQGT 93
           S+  + +  GFI+G SL+   RN+Y     R + AP +    N G  +     E W    
Sbjct: 22  SAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTY----NSGKGNTNGYSEAWAHAI 77

Query: 94  ILNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSD--GDPVGQWSKLGL 151
           I  ++SGFTQGTVGF V+A     + L        G ++  +   D  G+   +++K+G 
Sbjct: 78  ISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEARDEYTKVG- 136

Query: 152 GNIKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVS 211
           G  K R+ +T + +G     TP++A   +R LP SF+G  + +     L++  G    +S
Sbjct: 137 GAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMS 196

Query: 212 PRTEQSLSKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGANHV 271
                +L+     +    V +      G +Y    + + S+YA++++D WNQYY G + V
Sbjct: 197 QPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWTVSVYASQLKDVWNQYYAGTSVV 256

Query: 272 LGDSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYF 331
              S  L+L  G NYYK VD G +++G+ DN+ +S  +G+ + AHTL+ S Q+ NG++ F
Sbjct: 257 YPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDDF 316

Query: 332 DYLHETNGIFLANSL-LSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTH 390
           DYL +++ IF+ NS+  SDFN P E+S  L Y LN   YG+PGL F    ARG G D ++
Sbjct: 317 DYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYARGSGADYSN 376

Query: 391 ----YRGTAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLD 446
               Y  T  + N LD +  +E  +   Y +Q+GP KD S R    T RA+  + D  LD
Sbjct: 377 ANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRATAFESD--LD 434

Query: 447 EFRVVTTIPFNIL 459
           E RV+   P +IL
Sbjct: 435 ETRVIIEYPLSIL 447