Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  801 bits (2068), Expect = 0.0
 Identities = 377/532 (70%), Positives = 446/532 (83%), Gaps = 1/532 (0%)

Query: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLV 73
           MK  PL+ A+ A LL  A  ++AKPLVVCTEASPEGFD V YTTAVTADA+AET+FNRLV
Sbjct: 1   MKMLPLQAAMAAALLSVAIGVSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRLV 60

Query: 74  DFKPGTTEIQPALAERW-DISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNR 132
           DFKPGTTE+ PALA+   +ISADGLTYTFHLR  +KFHTTDYFKPTR++NADDVLWS  R
Sbjct: 61  DFKPGTTEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQR 120

Query: 133 QLDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTS 192
           QLDPNHPWH K+ VGYPYFESMGFKELLKSV K D+HTVV TL+RPEAPFL D+ M F+S
Sbjct: 121 QLDPNHPWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSS 180

Query: 193 IYSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVF 252
           I+S EY DQLLKSGKT +LN+KPIGTGPF+F RY KDAQ RFK NPDYFRGKP  D L+ 
Sbjct: 181 IHSKEYADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKANPDYFRGKPAVDPLIL 240

Query: 253 AIAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYL 312
           AI+ D+NVRLQKL+ANECQ+AL+PKPDD+PSIK+DP LKV+E+ A+ T Y A+NT HKY+
Sbjct: 241 AISTDNNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYM 300

Query: 313 NDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALL 372
           +D RVR AIN+AFD+  + + LFGKGNA+VG  PYPPT++G+N   +NPPRDLDKARALL
Sbjct: 301 SDARVRHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLKNPPRDLDKARALL 360

Query: 373 SQAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKN 432
            +AGVPEGT  TLFTRNGGGPTNPNP L A+ +QADL QIGLK++I+VMEW EML+RAKN
Sbjct: 361 KEAGVPEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEMLKRAKN 420

Query: 433 GEADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDER 492
           GE D+VS GW GDNGDPDNFL+P LSCDA K+GENYARWCN +FQ+LI +AR + +  +R
Sbjct: 421 GEHDMVSAGWVGDNGDPDNFLTPNLSCDAAKNGENYARWCNKEFQDLIDKARAIAEPAQR 480

Query: 493 ARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKVK 544
           A LY +A  V+D +QPW+ MA+PK+FTAMR NVEG+  +PL  NNFATT+VK
Sbjct: 481 AALYEQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGTNNFATTQVK 532