Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  484 bits (1246), Expect = e-141
 Identities = 246/530 (46%), Positives = 344/530 (64%), Gaps = 1/530 (0%)

Query: 9   MHRAFMKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETV 68
           M ++ MKSR L+ +L  L L  A  + AK LV C+E SPEGF+   +T+  T DAS+  +
Sbjct: 1   MAKSLMKSRVLKFSLGLLALSVAAGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPI 60

Query: 69  FNRLVDFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLW 128
           +NRLV+FK GTTEI+P LAE+WDISADG TYTFHLR+ VK+     FKP+R  NADDVL+
Sbjct: 61  YNRLVEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKDFKPSRTFNADDVLF 120

Query: 129 SLNRQLDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAM 188
           S  RQ+D NHP+H  +   Y YFE MG  +L+  + K D++TV   L+R EAPFL D+AM
Sbjct: 121 SFQRQIDANHPFHKVSGGSYEYFEGMGMPDLIGKIEKVDDYTVRFQLTRAEAPFLADLAM 180

Query: 189 GFTSIYSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPAD 248
            F SI SAEYGD++LK+G   +++  PIGTGPF  Q+Y KD+++ +K    ++  KP  D
Sbjct: 181 DFASIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKPGID 240

Query: 249 ALVFAIAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQ 308
            LVF+I  D++VR  KL+ +ECQV  YP P D+ ++KQD  +++ +   L  GY++ N +
Sbjct: 241 RLVFSITPDASVRYAKLQKDECQVMPYPNPADLTNMKQDKNIELLQKPGLNVGYLSFNVE 300

Query: 309 HKYLNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKA 368
            K L++V++R+A+  A ++Q  ++ ++ +G      N  PPTM GYN   ++   D  KA
Sbjct: 301 KKPLDNVKIRQALTYAVNKQAIIEAVY-QGAGQAAKNLIPPTMWGYNDDVKDYAYDPAKA 359

Query: 369 RALLSQAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLR 428
           +ALL +AG+  G  I L+      P NPN R  AEM+QAD  ++G+K  I   EW E L+
Sbjct: 360 KALLKEAGMENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEWGEYLK 419

Query: 429 RAKNGEADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVID 488
           RAK+GE   V  GW GDNGDPDNFL+ L SCDA K G NY++WC   F++LI  AR V D
Sbjct: 420 RAKSGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKGSNYSKWCYKPFEDLIQPARAVSD 479

Query: 489 NDERARLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNF 538
             +R  LY +A  V  D+ P + +AH  ++  +R NV+GYVI P   ++F
Sbjct: 480 QAKRIELYKQAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEPRGVHSF 529