Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 570 a.a., peptide ABC transporter substrate-binding protein SapA from Dickeya dianthicola ME23

 Score =  290 bits (743), Expect = 8e-83
 Identities = 159/500 (31%), Positives = 257/500 (51%), Gaps = 2/500 (0%)

Query: 40  VVCTEASPEGFDIVQYTTAVTADASAETVFNRLVDFKPGTTEIQPALAERWDISADGLTY 99
           V C       F+     + +  D  A  +++RL+   P T  + P LA+ WD++ +G TY
Sbjct: 39  VYCVNDVLSTFNPQMARSGLMVDTLAAQLYDRLLGVDPYTYRLMPELAQHWDVTDNGSTY 98

Query: 100 TFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDPNHPWHDKTSVGYPYFESMGFKEL 159
            F LR+ V F  T +F P+R +NADDVL+S  R L+  HP+HD     YPYF+S+   + 
Sbjct: 99  RFTLRRDVPFQRTAWFTPSRTMNADDVLFSFQRMLNKKHPFHDVNGGDYPYFDSLQLADN 158

Query: 160 LKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSAEYGDQLLKSGKTAELNSKPIGTG 219
           ++S+ K  ++++ I L  P+A FL  +A  +  + SAEY  QL +  +   L+ +P+GTG
Sbjct: 159 VQSIRKLGDYSIEIRLHSPDASFLWHLATHYAPVLSAEYAQQLTRQDRRELLDRQPVGTG 218

Query: 220 PFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFAIAIDSNVRLQKLRANECQVALYPKPD 279
           P+    Y     VR K + DY+RG+P  + ++  +      RL KL   EC V  YP   
Sbjct: 219 PYRLDEYRYGQYVRLKRHDDYWRGQPRMEQVLVDLGSGGTGRLSKLLTGECDVLAYPAAS 278

Query: 280 DVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDVRVRKAINMAFDRQTHVDQLFGKGN 339
            +  ++ DP+L++     +   Y+A N +   L+D RVR AI +A +    +  ++  G 
Sbjct: 279 QLTILRNDPRLRLSLRPGMNVAYLAFNVRKPPLDDSRVRHAIALAINNDRLMQSIY-YGT 337

Query: 340 ALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLSQAGVPEGTVITLFTRNGGGPTNPNPR 399
           A    +  P     Y+   Q    + +KAR  L + G+     + L+  +     NP+P 
Sbjct: 338 AETAASILPRASWAYDNEAQVTEYNPEKARQQLKELGI-TNLQLQLWVPSASQSYNPSPV 396

Query: 400 LSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEADLVSTGWAGDNGDPDNFLSPLLSC 459
            +AE++QADL Q+G+++ I  +E      R      DL   GWA D+ DPD+   PLLSC
Sbjct: 397 KTAELIQADLAQVGIRVTIMPVEGRFQEARLMEMNHDLTLAGWATDSNDPDSVFRPLLSC 456

Query: 460 DAVKSGENYARWCNPKFQELISRAREVIDNDERARLYNEALKVYDDEQPWISMAHPKMFT 519
            A++S  NYA WC+P F +++  A        R   Y  A  +  ++ P + +A      
Sbjct: 457 AAIRSQTNYAHWCDPGFDQVLQDALSSQQLSRRMEYYRVAHHILAEQLPVLPLASSLRMQ 516

Query: 520 AMRDNVEGYVINPLTNNNFA 539
           A R +++G V++P  N +FA
Sbjct: 517 AYRYDMKGLVLSPFGNASFA 536