Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  442 bits (1137), Expect = e-128
 Identities = 225/531 (42%), Positives = 324/531 (61%), Gaps = 1/531 (0%)

Query: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLV 73
           MK+   R+AL AL L  A    A  LV C+E SPE F+   YT+  + DASA  ++NRLV
Sbjct: 1   MKNAITRVALAALTLAAAQAACANTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRLV 60

Query: 74  DFKPGTTEIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQ 133
           DFK GTTE+ P+LAERWDIS DG  YTFHLR+GVKFH    F P+RD NADDV++S  RQ
Sbjct: 61  DFKVGTTELVPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIFSFQRQ 120

Query: 134 LDPNHPWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSI 193
            D NHP+H  +   Y  FES+ F+ L+ ++ + D++ V  TLS  EAPFL D+A  F S+
Sbjct: 121 RDLNHPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSHAEAPFLADLAWYFASV 180

Query: 194 YSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALVFA 253
            SAEY DQ+LK+G   +++ +PIGTGPF   +Y KD+++ ++  PDY++GK   D LVF+
Sbjct: 181 LSAEYADQMLKAGAPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYWQGKAKLDRLVFS 240

Query: 254 IAIDSNVRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLN 313
           I  D++VR  KLR NECQV  +P P ++  IK +  + + +   L  G++A NT+   L+
Sbjct: 241 ITPDASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQKAGLNIGFLAFNTRKAPLD 300

Query: 314 DVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLS 373
           +++VR+A+ MA ++   ++ +F +G      N  PP +       ++   D  KARALL 
Sbjct: 301 NLKVRQALTMAINKPAIIEAVF-QGTGSAAKNLLPPGVWSAAADLKDYEYDPGKARALLK 359

Query: 374 QAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNG 433
            AG+ EGT I L+      P NPN R  AEM+QAD  ++G+  +I   EW E L+R ++G
Sbjct: 360 DAGLAEGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVNANIVSYEWGEYLKRVRSG 419

Query: 434 EADLVSTGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERA 493
           E      GW    GDPDNF  PL +C +   G N ++WC P F +LI+ AR   D+ +R 
Sbjct: 420 EHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSSKWCYPPFDKLITDARAEQDHQKRV 479

Query: 494 RLYNEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKVK 544
            LY +A  +  ++ P + +AH  +F  +R+ V GY I+P   + F    ++
Sbjct: 480 ELYRQAQFMMHEQAPAVMIAHSTLFEPVRNTVTGYDIDPFGKHIFYQVDIR 530