Pairwise Alignments

Query, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 504 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  161 bits (408), Expect = 5e-44
 Identities = 139/517 (26%), Positives = 233/517 (45%), Gaps = 43/517 (8%)

Query: 23  LVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASA-ETVFNRLVDFKPGTTE 81
           L+AL L      AA  L +        FD ++  +A  AD      VF+ L+      T 
Sbjct: 14  LLALSLVSELAQAAGILTIGRREDSTTFDPIK--SAQNADNWVFSNVFDVLIRVDKTGTT 71

Query: 82  IQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDPNHP-W 140
           ++P LA+ W +S DG  YTF LR+         F     + A D ++SL+R  D     W
Sbjct: 72  LEPGLAQHWTVSPDGKVYTFTLREA-------RFSDGSPVTAQDAVFSLSRIRDSKESLW 124

Query: 141 HDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSAEYGD 200
            D  S+             + +++  D HT+V+TL  P APFL  +A+   S+       
Sbjct: 125 RDSYSI-------------IDTLAAPDAHTLVVTLKSPSAPFLSQLALPNASVLPENIVH 171

Query: 201 QLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPA-DALVFAIAIDSN 259
           +L +         KP+G+G F+ Q + +  ++    NP Y++    + D + +    D N
Sbjct: 172 RLGEE----TFAEKPVGSGAFVIQSWARGDKIVLTKNPYYWQADHVSLDGVEWQTIPDDN 227

Query: 260 VRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDVRVRK 319
            R+ K++A E   AL      + S+++DP LKV +  +    ++ +N  H  L  V VR+
Sbjct: 228 TRMLKVQAGELDAALSVPFSRLASLQKDPNLKVTQDPSTREDHLLINHAHGLLGKVEVRQ 287

Query: 320 AINMAFDRQTHVDQL-FGKGNALVGVNPY-PPTMIGYNTHNQNPPRDLDKARALLSQAGV 377
           A++ A D+   V  + F  G      N Y P   + +   N   P D +KA+ +L  AG 
Sbjct: 288 ALDYAIDKSAIVKTVTFNYGTV---ANSYLPKGALYFYADNLQRPYDPEKAKQMLKAAGA 344

Query: 378 PEGTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEADL 437
              T+   +  N G   +      A +LQ  L + G+ ++++ ++ ++       G+ DL
Sbjct: 345 SGLTL--NYVVNAGDEVDEQ---IAVLLQQQLAKAGVAVNLQKVDPSQNWSMLVAGDFDL 399

Query: 438 VSTGWAGDNGDPDNFLSPLLSCDAVKSGENY-ARWCNPKFQELISRAREVIDNDERARLY 496
               W  D  DPD   + +L  D   S  NY  R+ N K + L++ AR  +D  +R ++Y
Sbjct: 400 SVNYWTNDILDPDQKTTFVLGHD---SNMNYMTRYQNDKVKALVAAARVEMDPKKREQMY 456

Query: 497 NEALKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPL 533
            +  K+  D+  WI + +       R N+ G+  NPL
Sbjct: 457 IDLQKMAKDDVNWIDLYYSPYRNVTRKNISGFYQNPL 493