Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  384 bits (986), Expect = e-111
 Identities = 187/298 (62%), Positives = 238/298 (79%)

Query: 8   SVSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQY 67
           S    S   +S   P P +EFW AF+ N+GAV+GL  + L++  A+FAPW+APH P+E  
Sbjct: 3   STQTVSAGAKSTAPPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETN 62

Query: 68  RDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGL 127
               L PP W +GG+  ++LGTD +GRD+LSRL+ GARLSL IG++ V +S++ G++LGL
Sbjct: 63  SAVFLQPPAWQQGGSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGL 122

Query: 128 LAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTR 187
           +AGFF  +L  +IMRLMD++L LPSLLLA+ IVAILGPGL+N ++A+AIV LP YVR+TR
Sbjct: 123 IAGFFRGVLEIAIMRLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITR 182

Query: 188 AAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLG 247
           AAV+ E++RDYVTAAR++GAG  RLMF  VLPNC APLIVQA+L  S+AILDAAALGFLG
Sbjct: 183 AAVIAEVSRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLG 242

Query: 248 LGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 305
           LG QPP+PEWGTMLA AR+++ RAWWVV+ PGL IL++VLA NL+GDGLRDALDPKLK
Sbjct: 243 LGAQPPSPEWGTMLADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKLK 300