Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 296 a.a., peptide ABC transporter permease SapC from Escherichia coli ECRC62

 Score =  212 bits (539), Expect = 1e-59
 Identities = 114/279 (40%), Positives = 163/279 (58%)

Query: 22  PSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGG 81
           P   +  W+ F  +  A++GL     +    +F  W AP+   +Q+  + L PP W   G
Sbjct: 13  PGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYG 72

Query: 82  TWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIM 141
              F LGTD+LGRD+LSRL+ GA  ++       + + I G++LG  AG    L    + 
Sbjct: 73  EVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLN 132

Query: 142 RLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 201
            ++D +LA+PSLLLA+ +VA  GP L + + A+ +  LP  VR   + V  EL ++YV A
Sbjct: 133 HILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIA 192

Query: 202 ARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 261
           ARL GA    +++  V+PN  A L+ + T + S AILD AALGFL LG Q P+PEWG ML
Sbjct: 193 ARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAML 252

Query: 262 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL 300
             A + I  A W V LPG  I++SVL +NL+GDG+R A+
Sbjct: 253 GDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAI 291



 Score = 23.1 bits (48), Expect = 0.008
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 146 VMLALPSLLLAVAIVAILGPGLINTVIA 173
           VML   +++++V +V +LG G+   +IA
Sbjct: 266 VMLPGAAIMISVLLVNLLGDGVRRAIIA 293