Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  221 bits (564), Expect = 1e-62
 Identities = 120/265 (45%), Positives = 163/265 (61%), Gaps = 6/265 (2%)

Query: 39  VMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLS 98
           V G   + L++   +F+PW+A HDP+       L PP       W    GTDE+GRDL S
Sbjct: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPP---SAAHW---FGTDEVGRDLFS 87

Query: 99  RLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVA 158
           R++ G++ S+L GL  V ++ + G LLG L+G         IMR+MD+ML++PSL+L +A
Sbjct: 88  RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMA 147

Query: 159 IVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVL 218
           + A LGP L N ++AIAIV +P YVRL R   +      YV AA+  GA    L+   +L
Sbjct: 148 LAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHIL 207

Query: 219 PNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLP 278
            N + PLIVQA+L   SAIL AA LGF+GLG Q P+ EWG M+A+ R+Y+   WW  + P
Sbjct: 208 RNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFP 267

Query: 279 GLTILLSVLAINLMGDGLRDALDPK 303
           G  ILL+ +  NL GDG+RD LDPK
Sbjct: 268 GAAILLTAVGFNLFGDGIRDLLDPK 292