Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  222 bits (566), Expect = 8e-63
 Identities = 114/308 (37%), Positives = 187/308 (60%), Gaps = 18/308 (5%)

Query: 14  PVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSE-----QYR 68
           P  +SL       + + +F+R+K A +    + +++  A+FAPW+AP +P +      ++
Sbjct: 10  PARRSLFSHMRDSDLYWSFSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWK 69

Query: 69  DFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLL 128
             L  PP+W EGG W F+LGTD  GRD+LS ++ G R+S++IG++SVV+SL+ G+  GL+
Sbjct: 70  AEL--PPIWQEGGEWPFLLGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLV 127

Query: 129 AGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINT----------VIAIAIVS 178
           AG+F       +MR+ D+ L++P++L+A+ +  ++   L ++          ++AIA+ +
Sbjct: 128 AGYFGGFADGLLMRIGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSA 187

Query: 179 LPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAIL 238
              Y R  RA  + E  +DYV AA+L G    R+M   +LPN + P++V ATL+F  AIL
Sbjct: 188 WVQYARTVRAQAIVETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAIL 247

Query: 239 DAAALGFLGLGVQPPTPEWGTMLASARDYI-ERAWWVVSLPGLTILLSVLAINLMGDGLR 297
             A L FLG+G+ P  P  GT++     ++   +WW+V  P   + L V+ +NL+GD LR
Sbjct: 248 TEATLSFLGIGMPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLR 307

Query: 298 DALDPKLK 305
           DAL+PKL+
Sbjct: 308 DALNPKLR 315