Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  229 bits (583), Expect = 8e-65
 Identities = 116/265 (43%), Positives = 168/265 (63%), Gaps = 6/265 (2%)

Query: 39  VMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLS 98
           + G A + ++V  A+FAP +AP DP+ Q  +  L PP      +W  + GTDE GRD+ S
Sbjct: 37  MFGFAILAILVLVAVFAPLIAPFDPASQVLENALQPP------SWAHLAGTDEFGRDIFS 90

Query: 99  RLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVA 158
           RL+ G R+++   LS  ++    G+ +G++AGFF       +MR  D++L+ PSL+LA+A
Sbjct: 91  RLVYGTRITIQTVLSVSIIVGPIGLAIGVMAGFFGGRTDAILMRATDIVLSFPSLVLALA 150

Query: 159 IVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVL 218
             A +G GL   +IAI++ + P   RL RA  +   N DYV AARL GA   R++F+ + 
Sbjct: 151 FAAAMGAGLGTAIIAISLTAWPPIARLARAEALVVRNTDYVAAARLYGASPLRILFLYIA 210

Query: 219 PNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLP 278
           P C+  +IV+ TL+ +  IL AA+LGFLGLG QPP PEWG M++S R ++   WWV  +P
Sbjct: 211 PMCIPSVIVRLTLNMAGIILTAASLGFLGLGAQPPLPEWGAMISSGRKFMLDYWWVAVMP 270

Query: 279 GLTILLSVLAINLMGDGLRDALDPK 303
           G+ ILL+ LA N+ GD LRD LDP+
Sbjct: 271 GIAILLTSLAFNIAGDTLRDLLDPR 295