Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  253 bits (645), Expect = 5e-72
 Identities = 129/279 (46%), Positives = 185/279 (66%), Gaps = 6/279 (2%)

Query: 29  WQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSE-QYRDFLLTPPVWLEGGTWQFIL 87
           W+ F+ N+ A++GL  +  ++F ALFA  +APH+P +   R+  L PP     GT  ++L
Sbjct: 36  WRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPP-----GTAGYLL 90

Query: 88  GTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVM 147
           GTD+ GRD+LSRLI G+RL+L + L   +++   G+++G ++G+    +   +MR+ D+ 
Sbjct: 91  GTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIF 150

Query: 148 LALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGA 207
           LA P L+LA+A+VA LGPG+ N V+AIA+ S P Y R+ RA  M   N D++ A +L GA
Sbjct: 151 LAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGA 210

Query: 208 GLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDY 267
              R++   V+P C++ LIV+ TL  +  IL AA LGFLGLG QPP PEWG M+AS R +
Sbjct: 211 SPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRF 270

Query: 268 IERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLKN 306
           I   WWV ++PG+ IL+  L  NL+GDGLRDALDPK  N
Sbjct: 271 ILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPKEAN 309