Pairwise Alignments

Query, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

Subject, 331 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  206 bits (524), Expect = 6e-58
 Identities = 108/272 (39%), Positives = 167/272 (61%), Gaps = 6/272 (2%)

Query: 32  FARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDE 91
           F  N  A++GL F+  V+  AL AP + P DP E     +  P +W  G    + LGTD 
Sbjct: 60  FLTNPNAIVGLLFLATVLIAALIAPLIYPGDPLEM----VARPFLW-PGQNAAYPLGTDS 114

Query: 92  LGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALP 151
           +GRD+L+ ++ GAR+SL +G+ + ++ L  GI +G  AG+F  ++   +++L+++   LP
Sbjct: 115 MGRDVLAGIVHGARISLTVGVVATLIGLTIGISIGAFAGYFGGVIDDILVKLIEIFQTLP 174

Query: 152 SLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPR 211
           + +L V +VAI  P +     AI I++ P   RLTRA       +DYV AAR  G G  R
Sbjct: 175 NFVLLVVLVAIAQPSVTTVTSAIGIITWPLVARLTRAEFRAIREKDYVLAARSLGYGHAR 234

Query: 212 LMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERA 271
           ++F  +LPN + P+IV +++  + AIL  AAL F+GLG  P    WG+M+ S RD I  A
Sbjct: 235 IVFQEILPNALPPIIVTSSVMVAGAILMEAALSFMGLG-DPNRVSWGSMIGSGRDVIRTA 293

Query: 272 WWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303
           W++ +LPGL I+ +V+++NL+ DGL DAL+P+
Sbjct: 294 WYLTALPGLAIVFTVISLNLISDGLNDALNPR 325