Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 350 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  285 bits (729), Expect = 1e-81
 Identities = 150/311 (48%), Positives = 206/311 (66%), Gaps = 9/311 (2%)

Query: 2   SLLQINNLNVRFGDANAVPVV-DGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP- 59
           +LL++ +L+V F       +V +G+D ++ AGE L +VGESG GKS+T +AL+ LI +P 
Sbjct: 8   TLLRVQDLHVEFKTRRGQALVLNGVDFEIRAGETLCVVGESGCGKSMTALALLRLIPSPP 67

Query: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHL 119
           GRI +  + F G D+++ S  + R+V G  I+M+FQ+PMT+LNP +TVG QI E LR H 
Sbjct: 68  GRIRSGQVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVGEQIGESLRLHA 127

Query: 120 GLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179
           GL   AA +RA+E+L++V IPA E R+D YPHQLSGGM QRV IAMA+A  P +LIADEP
Sbjct: 128 GLNAHAASERAIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALACRPDILIADEP 187

Query: 180 TTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPE 239
           TTALDVT+QAQI +LL  LQ+++  A++LITHD+  VAE A RV VMYAG+ +E G   +
Sbjct: 188 TTALDVTVQAQIFDLLRELQRDKGTAIMLITHDMGAVAEMADRVMVMYAGRVIEQGTTEQ 247

Query: 240 LFDVPAHPYSEALLAAIPEHSIGA-------ERLATLPGIVPGRYDRPVGCLLSPRCPYV 292
           +   P HPY+  L+  +PE    A       E LA + G+VP  ++   GC    RCP  
Sbjct: 248 VLSEPGHPYTRGLIDCLPELGSSAAYGDGAREELAEIAGVVPSIWELGTGCAFRERCPRA 307

Query: 293 QDNCRRQRPPL 303
              C  + PP+
Sbjct: 308 LARCATEVPPM 318