Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  286 bits (733), Expect = 4e-82
 Identities = 146/304 (48%), Positives = 202/304 (66%), Gaps = 1/304 (0%)

Query: 1   MSLLQINNLNVRFGDANA-VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP 59
           M+LLQ+ +L V F      +  +D +   +  GEIL +VGESG+GKS+T  A++GL+++P
Sbjct: 1   MTLLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESP 60

Query: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHL 119
           GR+    +  +G  +  L     R + G+ I  +FQDP+T+LNP YTVG Q+ E +R HL
Sbjct: 61  GRVAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHL 120

Query: 120 GLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179
            +    AR+RA+ LL+   IPAAE R+D +PHQ SGGM QRV IA+A+A EPKL++ADEP
Sbjct: 121 PVTDAEARKRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEP 180

Query: 180 TTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPE 239
           TTALDV+IQAQI++LL  + KER  A++LITHD+ V+AET  RV VMYAG+  E+G V E
Sbjct: 181 TTALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHE 240

Query: 240 LFDVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQ 299
           +   PAHPY+  L+A+IP+ +   ERL  + G +P     P GC  +PRCP     C  +
Sbjct: 241 VIHQPAHPYTSGLMASIPDMTSDRERLNQIDGAMPRLNAIPTGCAYNPRCPRTFARCLTE 300

Query: 300 RPPL 303
           RP L
Sbjct: 301 RPEL 304