Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 330 a.a., peptide ABC transporter ATP-binding protein SapD from Dickeya dianthicola ME23

 Score =  242 bits (618), Expect = 8e-69
 Identities = 134/329 (40%), Positives = 195/329 (59%), Gaps = 10/329 (3%)

Query: 1   MSLLQINNLNVRFGDANA-VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP 59
           M+LL+I NL + F   +  V  VD + + +  GEI  +VGESGSGKS+   A+ G+    
Sbjct: 1   MALLEIRNLTIEFLTPDGPVKAVDRVSISLTEGEIRGLVGESGSGKSLVAKAICGINKEN 60

Query: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVL---- 115
            RITAD   FD  DML+L+  QRRK+V  +++M+FQ+P + L+PS  +G Q+ + +    
Sbjct: 61  WRITADRFRFDDVDMLQLTPHQRRKLVRHNMSMIFQEPQSCLDPSARIGRQLMQSIPGWT 120

Query: 116 -RQHLGLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLL 174
            +     +    ++RA+ELL +V I   +  + ++P++L+ G  Q+V IA+A+A +P+LL
Sbjct: 121 YKGRWWQRVNWRKRRAIELLHRVGIKDHQDIMRSFPYELTEGECQKVMIAIALANQPRLL 180

Query: 175 IADEPTTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEV 234
           IADEPT A++ T QAQI  LL  L +  N  ++LI+HDL  +++ A R+ V+Y GQ VE 
Sbjct: 181 IADEPTNAMEATTQAQIFRLLARLNQNNNTTILLISHDLQTMSKWADRINVLYCGQTVES 240

Query: 235 GQVPELFDVPAHPYSEALLAAIPEHSIG---AERLATLPGIVPGRYDRPVGCLLSPRCPY 291
               EL   P HPY++AL+ A+P+         RL  LPG +P     PVGC L PRCPY
Sbjct: 241 AVSGELISAPHHPYTQALIRAMPDFGCSLPHKSRLNALPGAIPSLAHLPVGCRLGPRCPY 300

Query: 292 VQDNCRRQRPPLDPQAHSLVRCFYPLNQE 320
            Q  C    PPL P       C +PLN E
Sbjct: 301 SQKKC-MTAPPLTPVKTHWYACHFPLNME 328