Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  278 bits (710), Expect = 2e-79
 Identities = 142/317 (44%), Positives = 202/317 (63%), Gaps = 2/317 (0%)

Query: 2   SLLQINNLNVRF-GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPG 60
           ++L+I  L      D   + ++D + L + AGE++ +VGESGSGKSVT +++MGL+D P 
Sbjct: 3   AMLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPV 62

Query: 61  RITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLG 120
           ++T   + F G D+   S ++ R + G  IAM+FQDPM+ LNP   +  Q+ EV+  H  
Sbjct: 63  QMTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHEN 122

Query: 121 LKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180
           +  + AR+RA + L  V IP+ E RL AYPHQ SGGM QRVAIA+A+   P ++IADEPT
Sbjct: 123 VSKQVARERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADEPT 182

Query: 181 TALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPEL 240
           TALDVTIQAQI+ ++  L +E+  ALI +THDL+VVA  A ++ VMYAG+ VE G   +L
Sbjct: 183 TALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTADL 242

Query: 241 FDVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQR 300
              P HPY+  L+A++P H+   ERL  + G  P   + P GC   PRC +  + C    
Sbjct: 243 LRRPLHPYTNGLIASLPAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICLNS- 301

Query: 301 PPLDPQAHSLVRCFYPL 317
           P L+P    L+RCF+P+
Sbjct: 302 PALEPTEGRLLRCFHPV 318