Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  251 bits (640), Expect = 4e-71
 Identities = 135/257 (52%), Positives = 173/257 (67%), Gaps = 1/257 (0%)

Query: 3   LLQINNLNVRF-GDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGR 61
           +L + NL   F  D     VV  +   V +GE +AIVGESGSGKSVT ++LM L+     
Sbjct: 6   VLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPASS 65

Query: 62  ITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLGL 121
                +  +G ++L LS R+ R V G DI+M+FQ+PMT+LNP +T+G QI EVL +H GL
Sbjct: 66  HIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHKGL 125

Query: 122 KGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
             + AR   + LL+KV IP A SR D YPHQ SGGM QRV IAMA+A  PKLLIADEPTT
Sbjct: 126 SKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADEPTT 185

Query: 182 ALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPELF 241
           ALDVTIQ QI++L+  LQ+E  M+++ ITHD+ VVAE A R  VMY G AVE G   ++F
Sbjct: 186 ALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGATEDIF 245

Query: 242 DVPAHPYSEALLAAIPE 258
               HPY+ ALL+A+P+
Sbjct: 246 RRGQHPYTRALLSAVPK 262



 Score =  189 bits (481), Expect = 1e-52
 Identities = 105/263 (39%), Positives = 162/263 (61%), Gaps = 15/263 (5%)

Query: 3   LLQINNLNVRFG--------DANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMG 54
           +L + NL  RF            AV  V+ +   +  GE L++VGESG GKS T  ++M 
Sbjct: 302 VLSVKNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMR 361

Query: 55  LIDAPGRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEV 114
           L++     ++  ++ DG D+++L     R +  K + M+FQDP ++LNP  TVG  I E 
Sbjct: 362 LVEP----SSGDVSLDGYDVMRLDTVGLRNM-RKSVQMIFQDPFSSLNPRMTVGTAISEP 416

Query: 115 LRQHLGLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLL 174
             +H     K A+++  +LL+KV + A     + YPH+ SGG  QR+AIA A+A +PK++
Sbjct: 417 FIKHRLGSTKQAKEKTADLLEKVGLSA--DMANRYPHEFSGGQRQRIAIARALALDPKVI 474

Query: 175 IADEPTTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEV 234
           +ADE  +ALDV+I+AQ+  LL++LQ+  N+A + I+HD+AVV   + RV VMY G+ VE+
Sbjct: 475 VADESVSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEI 534

Query: 235 GQVPELFDVPAHPYSEALLAAIP 257
           G    +FD P HPY++ L+AA+P
Sbjct: 535 GPRAAVFDNPQHPYTKKLMAAVP 557