Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  251 bits (640), Expect = 4e-71
 Identities = 135/257 (52%), Positives = 178/257 (69%), Gaps = 4/257 (1%)

Query: 2   SLLQINNLNVRFGDANAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAPGR 61
           +LL +  L+V FGD+    VVD +  +V+ G  +A+VGESGSGKSVT ++ M L D  G 
Sbjct: 8   ALLSVEGLSVEFGDSR---VVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGA 64

Query: 62  I-TADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHLG 120
                 + F+G D+LK S ++ R + GK+IAM+FQ+PMT+LNP +T+G QI EVL  H  
Sbjct: 65  TYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVLVLHEK 124

Query: 121 LKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180
           L   AA ++A +LL  V +P A   L  YPHQLSGGM QRV IAMA+A  PKLLIADEPT
Sbjct: 125 LGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADEPT 184

Query: 181 TALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPEL 240
           TALDVTIQAQI+ ++ +LQK+  M ++ ITHD+ VVAE A  V VM+ G+ VE G V ++
Sbjct: 185 TALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVKDI 244

Query: 241 FDVPAHPYSEALLAAIP 257
           F  P HPY+ ALL+A+P
Sbjct: 245 FANPQHPYTRALLSAVP 261



 Score =  185 bits (469), Expect = 3e-51
 Identities = 114/283 (40%), Positives = 170/283 (60%), Gaps = 19/283 (6%)

Query: 3   LLQINNLNVRF-------GDA-NAVPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMG 54
           LL + +L VRF       G A + +  V  +   + AGE LA+VGESGSGKS     +  
Sbjct: 304 LLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGRTIQQ 363

Query: 55  LIDAPGRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEV 114
           L  A     +  + F+G    ++S  +R ++  +++  +FQDP  +L+P  TVGF I E 
Sbjct: 364 LQTA----VSGEIAFNGRSYSQMSAAERFRM-RQEVQYIFQDPFASLDPRKTVGFSIAEP 418

Query: 115 LRQHLGLKG--KAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPK 172
           +  H GL    KA R+R  ELL++V + +  +    YPH+ SGG  QRV IA A+A +PK
Sbjct: 419 INTH-GLINDQKAVRRRVDELLERVGLSSEHAA--RYPHEFSGGQRQRVCIARALASDPK 475

Query: 173 LLIADEPTTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAV 232
           L+IADE  +ALDV+IQAQI+ L ++LQ ER +A + I+HD+AVV + + RV V+Y GQ +
Sbjct: 476 LIIADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIM 535

Query: 233 EVGQVPELFDVPAHPYSEALLAAIPEHSIGAE-RLATLPGIVP 274
           E+G   ++F+ P H Y+  LL+A+P      E R+A + G +P
Sbjct: 536 ELGSRQQVFETPTHDYTRRLLSAVPVADPTIERRIAMIEGEIP 578