Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 344 a.a., Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  380 bits (975), Expect = e-110
 Identities = 186/320 (58%), Positives = 238/320 (74%), Gaps = 4/320 (1%)

Query: 3   VVLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTL 62
           VV+ A  L R Y++ RGLF+  + +RA+  +SF +E G+TLAVVGESGCGKSTLAR + L
Sbjct: 8   VVVEATNLQRTYDIRRGLFRAPSHLRAVGDISFRIERGRTLAVVGESGCGKSTLARMVAL 67

Query: 63  IEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINT 122
           IE+P++G L + GT+        +++LR+ VQ+VFQ+PY SLNPR+KI   L +PL INT
Sbjct: 68  IEKPTAGQLTLVGTDAVDTPAERKRELRQAVQLVFQNPYGSLNPRKKISAVLEDPLAINT 127

Query: 123 SLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTS 182
           ++ K ER  K ++M+ +VGLRPE+  RYPHMFSGGQRQRIA+ARA+ML P++LVADEP S
Sbjct: 128 TMGKQERAAKAREMLARVGLRPEYANRYPHMFSGGQRQRIAIARALMLNPRLLVADEPVS 187

Query: 183 ALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIY 242
           ALDVSIQAQVLNL  DLQ E   AY+FISH+L VVRH+A  VLVMYLG   E GPK  I+
Sbjct: 188 ALDVSIQAQVLNLLADLQAELGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPKSRIF 247

Query: 243 AKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEV 302
           ++PLHPYTQALL++TP +       +I + GELP+PLNPP GC F  RCP+  ERC +E 
Sbjct: 248 SRPLHPYTQALLASTPGLS----SQRIVLKGELPSPLNPPAGCVFSTRCPHVAERCRQER 303

Query: 303 PALRQVSTRQVACHYAEQFL 322
           P  R +  R VACHY+E+FL
Sbjct: 304 PLPRMLDERLVACHYSEKFL 323