Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 276 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  259 bits (661), Expect = 7e-74
 Identities = 129/256 (50%), Positives = 180/256 (70%), Gaps = 1/256 (0%)

Query: 4   VLSARELTRHYEVSRG-LFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTL 62
           +L   +L RHY + R  LF     V+ALNGVSFE++AGK++ +VGESG GKST+AR +  
Sbjct: 10  LLQVTDLVRHYALPREKLFGPPPTVKALNGVSFEVQAGKSVGIVGESGSGKSTIARLVMA 69

Query: 63  IEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINT 122
           ++ P+SGS+++ G ++    KAE +  RRD QMVFQ PY SL+PRQ +   +AEPL    
Sbjct: 70  LDTPTSGSVRLEGRDLHTLPKAELRTARRDFQMVFQDPYGSLDPRQTVARIVAEPLEALA 129

Query: 123 SLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTS 182
             S+AE+R++  + +  VGLR     +YPH FSGGQRQRIA+ARA++ +PK++VADEP S
Sbjct: 130 ETSRAEQRERASEALAAVGLRTTDMDKYPHEFSGGQRQRIAIARALITRPKLIVADEPVS 189

Query: 183 ALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIY 242
           ALDVS+QAQVLNL  DLQ++F  +Y+ ISH+LAVV H+ D+V V++ G+  E G   +++
Sbjct: 190 ALDVSVQAQVLNLMQDLQQQFGISYLLISHDLAVVNHLCDEVCVVWKGKIVEQGQPSELF 249

Query: 243 AKPLHPYTQALLSATP 258
               HPYT+ LL A P
Sbjct: 250 QHAQHPYTRTLLEAVP 265