Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 334 a.a., dipeptide ABC transporter ATP-binding subunit DppF from Escherichia coli ECRC62

 Score =  375 bits (964), Expect = e-109
 Identities = 184/317 (58%), Positives = 233/317 (73%)

Query: 4   VLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLI 63
           +L A +L +HY V +G+F    LV+AL+GVSF LE GKTLAVVGESGCGKSTL R LT+I
Sbjct: 12  LLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMI 71

Query: 64  EEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTS 123
           E P+ G L   G ++       +K  R+ +Q+VFQ+PY SLNPR+K+G  L EPLLINTS
Sbjct: 72  ETPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTS 131

Query: 124 LSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSA 183
            SK +RR+K   MM +VGL+ EHY RYPHMFSGGQRQRIA+AR +ML P V++ADEP SA
Sbjct: 132 FSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSA 191

Query: 184 LDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYA 243
           LDVS++AQVLNL MDLQ+E   +YVFISH+L+VV H+AD+V+VMYLGR  E G K+ I+ 
Sbjct: 192 LDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFN 251

Query: 244 KPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVP 303
            P HPYTQALLSATP ++PD  + +I++ GELP+PLNPP GCAF+ RC      C +  P
Sbjct: 252 NPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCRRRFGPCTQLQP 311

Query: 304 ALRQVSTRQVACHYAEQ 320
            L+    + VAC   +Q
Sbjct: 312 QLKDYGGQLVACFAVDQ 328