Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 632 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  259 bits (661), Expect = 2e-73
 Identities = 136/278 (48%), Positives = 188/278 (67%), Gaps = 2/278 (0%)

Query: 4   VLSARELTRHYEVSRGLFKGHA-LVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTL 62
           +L  R L  +Y +  G+       V A+  + F +  G+TLA+VGESGCGKST  RAL  
Sbjct: 320 LLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRALLR 379

Query: 63  IEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLIN- 121
           + E  S SL   G E+ G    + + LRR +QMVFQ PYASLNPR  +G  +AEPLL++ 
Sbjct: 380 LVESQSDSLLFDGQEIAGLRDRDFQPLRRKMQMVFQDPYASLNPRLTVGFTIAEPLLLHG 439

Query: 122 TSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPT 181
            + S  +   +VQ +++ VGL PEH QRYPH FSGGQRQRIA+ARAM LQP+V++ADE  
Sbjct: 440 LAKSLEDATPQVQALLKSVGLLPEHAQRYPHEFSGGQRQRIAIARAMALQPQVIIADEAV 499

Query: 182 SALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDI 241
           SALDVSIQAQV+NL MDLQ++   +++FISH++AVV  +A++V VMYLG+  E+GP++ +
Sbjct: 500 SALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIGPRQSV 559

Query: 242 YAKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPL 279
           +  P HPYT+ LL++ P   P+    +     E+P+PL
Sbjct: 560 FNNPQHPYTRRLLASVPIADPNRRYARELDDSEIPSPL 597



 Score =  178 bits (452), Expect = 3e-49
 Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 12/244 (4%)

Query: 29  ALNGVSFELEAGKTLAVVGESGCGKST-------LARALTLIEEPSSGSLQIAGTE---V 78
           AL GVSF L  G+ +AVVGESG GKS        L  A   IE      +  AG     +
Sbjct: 41  ALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVMGLLAASARIERGGIRFIDNAGRRHDLL 100

Query: 79  KGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTSLSKAERRDKVQKMME 138
                A R+   RD+ M+FQ P  SLNP  K+GDQL E LL +     A    K ++++ 
Sbjct: 101 TMKDDARRRLRGRDMAMIFQEPMTSLNPVLKVGDQLTEALLDHQMCDAASAERKARELLR 160

Query: 139 QVGLRP--EHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLF 196
           +V +         YPH  SGG RQR+ +A+A+   P++L+ADEPT+ALDV++QA++L + 
Sbjct: 161 KVRIADIDRVMNSYPHSLSGGMRQRVMIAQALACDPQLLIADEPTTALDVTVQARILQIL 220

Query: 197 MDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYAKPLHPYTQALLSA 256
            DLQ++ N + +FI+H++ VV  +AD+V+VMY G   E G  + I+ +P H YT+ALL+A
Sbjct: 221 RDLQRQSNMSVLFITHDMGVVAEIADRVVVMYRGEVVEQGTVDAIFNRPQHDYTKALLAA 280

Query: 257 TPAI 260
            P +
Sbjct: 281 VPRL 284