Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 334 a.a., murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF from Dickeya dadantii 3937

 Score =  288 bits (738), Expect = 1e-82
 Identities = 148/319 (46%), Positives = 213/319 (66%), Gaps = 6/319 (1%)

Query: 3   VVLSARELTRHYEV---SRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARA 59
           V+L   EL  H+++    +  ++    ++A++GV+  L  G+TL VVGESGCGKSTLARA
Sbjct: 9   VLLEVDELKVHFDIRDDKQWFWQPARKLKAVDGVTLRLYEGETLGVVGESGCGKSTLARA 68

Query: 60  LTLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPL- 118
           +  + + +SG +   G ++ G    E + +R D+QM+FQ P ASLNPR  IG+ +AEPL 
Sbjct: 69  IIGLVKATSGRISWLGKDLLGMRDTEWRSVRSDIQMIFQDPLASLNPRMTIGEIIAEPLR 128

Query: 119 LINTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVAD 178
             +  + + E +D+V+ MM +VGL P    RYPH FSGGQ QRI +ARA++L+PK+++ D
Sbjct: 129 TYHPEMPRQEVKDRVKAMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICD 188

Query: 179 EPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPK 238
           EP SALDVSIQAQV+NL   LQ+E   + +FI+H+L+VV+H++D+VLVMYLG   E+G  
Sbjct: 189 EPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLSVVKHISDRVLVMYLGHAVELGTY 248

Query: 239 EDIYAKPLHPYTQALLSATPAIHPDPLKPK-IRIV-GELPNPLNPPDGCAFHKRCPYATE 296
           +++Y  P HPYT+AL+SA P   PD  + K I+++ G+LP+P+NPP GC F  RCP    
Sbjct: 249 DELYHNPQHPYTRALMSAVPIPDPDKERNKQIQLLEGDLPSPINPPTGCVFCTRCPVVGP 308

Query: 297 RCAKEVPALRQVSTRQVAC 315
            C K  P L       V+C
Sbjct: 309 ECTKTRPVLEGSFRHAVSC 327