Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 340 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  285 bits (728), Expect = 1e-81
 Identities = 150/323 (46%), Positives = 214/323 (66%), Gaps = 18/323 (5%)

Query: 5   LSARELTRHYEVSRGLF------KGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLAR 58
           L+ + LT+ ++VS  L       K    V+A+N + F + AG  L++VGESGCGKST+AR
Sbjct: 16  LTVKGLTKTFDVSAPLLNRIIERKPRQFVQAVNDIDFAVPAGGCLSIVGESGCGKSTVAR 75

Query: 59  ALTLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPL 118
            +T +  PS+G+ Q A       S    K L    QM+FQ PYASLNPR ++ + +AEP+
Sbjct: 76  LVTGLFRPSAGAFQFA-------SGGNGKPL--SAQMIFQDPYASLNPRWRVKNIIAEPI 126

Query: 119 L-INTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVA 177
             +    +KAE  ++V+++++ VGL     +++PH FSGGQRQRI++ARA+  +P+ LV 
Sbjct: 127 RELKLRATKAEAMERVEELLQTVGLSASDGEKFPHEFSGGQRQRISIARALASEPEFLVC 186

Query: 178 DEPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGP 237
           DEPTSALDVS+QAQVLNL   LQ E    Y+FISH+++VVRH++D++ VMYLGR  E G 
Sbjct: 187 DEPTSALDVSVQAQVLNLMRRLQDELGLTYLFISHDMSVVRHMSDRIAVMYLGRIVEEGD 246

Query: 238 KEDIYAKPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATER 297
            E+++A P HPYT+ LL   P I   P + +  + GE+P+PL PP GCAFH RCP AT +
Sbjct: 247 TEELFANPRHPYTRLLLQTIPNI-KTPQRDREIVAGEVPSPLKPPSGCAFHPRCPLATAQ 305

Query: 298 CAKEVPALRQVST-RQVACHYAE 319
           C+ EVP ++ ++   +VACH  E
Sbjct: 306 CSAEVPKVKSLANGTRVACHLVE 328