Pairwise Alignments

Query, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

Subject, 311 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  299 bits (766), Expect = 5e-86
 Identities = 149/317 (47%), Positives = 218/317 (68%), Gaps = 9/317 (2%)

Query: 4   VLSARELTRHYEVSRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLI 63
           +LS   L+ HY   RG       VRA++ VS ++EAG+T+A+VGESGCGKS+L ++L  +
Sbjct: 3   LLSVHSLSTHYTGGRGT------VRAVDDVSLDIEAGETVALVGESGCGKSSLGKSLMRL 56

Query: 64  EEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPLLINTS 123
            EPSSG +   G +V   + ++ + +RR +QM+FQ P+ASLNPRQ +   L  PL ++  
Sbjct: 57  VEPSSGRITFKGADVTAMTSSQLRGIRRRIQMIFQDPFASLNPRQTVRTILTAPLKVHGI 116

Query: 124 LSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSA 183
             +A +R+ V+ ++ QVGL P+   RYPH FSGGQRQRI +ARA++L+P+++V DEP SA
Sbjct: 117 GDRARQREIVEAIVAQVGLPPDALDRYPHEFSGGQRQRIGIARALVLEPELVVCDEPVSA 176

Query: 184 LDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPKEDIYA 243
           LD+SIQAQ+LNL ++++K  + +Y+F+SH+L+VVR+ +D+VLVMYLG+  E  P  +++A
Sbjct: 177 LDLSIQAQILNLLVEMKKRLSLSYLFVSHDLSVVRYFSDRVLVMYLGKIVESAPTAELWA 236

Query: 244 KPLHPYTQALLSATPAIHPDPLKPKIRIVGELPNPLNPPDGCAFHKRCPYATERCAKEVP 303
            P HPYT+ALL+A P   P   K    I G+LP+P +PP GC FH RCP AT+ C ++ P
Sbjct: 237 SPKHPYTRALLAAVP--DPARRKQAAPISGDLPSPHDPPAGCRFHTRCPLATDLCREKAP 294

Query: 304 ALRQV-STRQVACHYAE 319
                     VACH+A+
Sbjct: 295 DYALFGKNHAVACHHAQ 311