Pairwise Alignments

Query, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 269 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  367 bits (941), Expect = e-106
 Identities = 178/261 (68%), Positives = 216/261 (82%), Gaps = 4/261 (1%)

Query: 13  DGPEQTPLTAEIVLRYHLCWKHRDLDGVMALYHPDIQYHDFFQNRVLGHQELRDYVRACL 72
           D  +Q+  T E+VLR+HLCW+HRDL+GVM+ YHPDIQYHDFFQNRV+G+ ELR+Y++A +
Sbjct: 8   DDSQQSHATRELVLRHHLCWRHRDLEGVMSYYHPDIQYHDFFQNRVVGYAELREYLQASM 67

Query: 73  PHEAGEDIVHSDRIRVDGSTAFIQYQVTVQGGDGLVAFQSSEAITVRDGLIWRVNEYATL 132
           P EA E I HSDRIR DG TAFIQY++T++GG GLV+F++SEAITVRDGLIWRVNEYA+L
Sbjct: 68  PREADEAIEHSDRIRADGDTAFIQYRITLRGGHGLVSFRTSEAITVRDGLIWRVNEYASL 127

Query: 133 VRQNGTGHANSGPRPATSRLGLSPRQLSTMAQDLEHYFRRQRPYLDPELDLQQVADASGY 192
           V +     A    RP+ SRLGLSP+QL  MA DL+ YF+ ++PYLDPELDLQ+V+   GY
Sbjct: 128 VHEQPAQAA----RPSVSRLGLSPQQLGHMANDLQQYFQHKQPYLDPELDLQRVSKECGY 183

Query: 193 SRNQISYLLNQVLGQSFYRYVNQARLQHLMASLGDDSVEATIDELAFSAGFNSLSAFYKC 252
           SRNQISYLLNQVLGQSFYRYVNQARLQHL+A+L        +D+LAF+AGFNSLSAFY  
Sbjct: 184 SRNQISYLLNQVLGQSFYRYVNQARLQHLLAALDKAVPPIKVDDLAFAAGFNSLSAFYSA 243

Query: 253 FREHTGFTPKAYLKQISLRAR 273
           FR+HTG +PKAY+KQISLRAR
Sbjct: 244 FRQHTGQSPKAYVKQISLRAR 264