Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  391 bits (1005), Expect = e-113
 Identities = 188/360 (52%), Positives = 259/360 (71%), Gaps = 6/360 (1%)

Query: 5   LLAPLMLAASVASAA-----ETVKIYNWSSYVAPDTLKNFQ-QASGIVPTYDVYDSNETL 58
           +L  L+L A+V S       +T+++YNW  Y+ P  L++F+ Q   I   YD++D+NE L
Sbjct: 3   MLKSLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEAL 62

Query: 59  DGKLMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQ 118
           + KL+TGN+GYDVV PSN F+A+QI+    + LD+S+L NW +L+P L+K +E NDPGN+
Sbjct: 63  EAKLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNK 122

Query: 119 YGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLP 178
           +  PY++G+  IG+N DKVKA LG NAPVDSWDLIFK E +SKLK CGVA+LD+  E+LP
Sbjct: 123 FAVPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILP 182

Query: 179 IALHYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVL 238
           +AL +LGL  +S +PKDY KA+ LL+K+RPY++YFHSSKY  D+ANGDICV VG+SG   
Sbjct: 183 LALQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFS 242

Query: 239 QAKNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANIS 298
           QA NRA +A NGV V   +PKEGAP+WFDM+A+P  A + +  Y ++NYLLQP+V+A IS
Sbjct: 243 QAANRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPIS 302

Query: 299 NHVQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
           + V Y N N  A   VDP+++ N  +YP++  M  LY L+ +    +R RTR W+ IK+G
Sbjct: 303 DFVGYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362