Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  407 bits (1047), Expect = e-118
 Identities = 194/352 (55%), Positives = 259/352 (73%), Gaps = 2/352 (0%)

Query: 7   APLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGN 66
           A + L  SV  AA TV IYNWS Y+  DTL NF++ASGI P YDV+DSNETL+GKL+ G 
Sbjct: 14  AGITLTLSV-QAAPTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEGKLLAGR 72

Query: 67  SGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWG 126
           +GYDVV PSNHF+ +QI+  A ++LDKS L N+ NL+P LLK LE NDPGNQY  PYLWG
Sbjct: 73  TGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAVPYLWG 132

Query: 127 STGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGL 186
           + GIGYN DK K VLG +  +DSW ++F+PE M KL +CGV+ +D+  E+LP  L+Y+GL
Sbjct: 133 TNGIGYNGDKGKEVLGVDH-IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGL 191

Query: 187 PHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADE 246
             +S +P DY+KA++ L+KVRPY++YFHSSKY  DLANG+ICV  GFSGDV QAK RA E
Sbjct: 192 NPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAE 251

Query: 247 ANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANG 306
           A  GV + Y+IPKEG  +WFD++A+P DA + K  +A++NYLLQPEV+A +S++V YAN 
Sbjct: 252 AGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDYVGYANP 311

Query: 307 NLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
           N  AD L++ +++ +  +YP   V+ + +    +P K+ R+ TR WT +K G
Sbjct: 312 NPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTG 363