Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  400 bits (1027), Expect = e-116
 Identities = 189/354 (53%), Positives = 254/354 (71%), Gaps = 4/354 (1%)

Query: 6   LAPLMLAASVASAAE---TVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKL 62
           L PL L A+ +SA++   TV +YNW+ Y+   TL +FQ  +GI P YDV+DSNETL+GKL
Sbjct: 7   LFPLALVAAFSSASQAAPTVSVYNWTDYIGETTLADFQAKTGIKPIYDVFDSNETLEGKL 66

Query: 63  MTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFP 122
           + G +GYDVV PSNHF+ARQ++  A  +LD+++LPN+ NL+P LLK LE NDPGN +  P
Sbjct: 67  LAGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPNFKNLDPKLLKLLEKNDPGNAHSVP 126

Query: 123 YLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALH 182
           YLWG+ GIGYN+DKVK VLG +A +DSW ++F+PE + KL  CGVA LD+  EL P  L+
Sbjct: 127 YLWGTNGIGYNVDKVKEVLGIDA-IDSWAVLFEPENIKKLNQCGVAFLDSADELFPAILN 185

Query: 183 YLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKN 242
           Y+G    S++P+DY++A+  L+ +RPYI+YFHSSKY  DLANG+ICV  G+SGDV QA N
Sbjct: 186 YMGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAAN 245

Query: 243 RADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQ 302
           RA EA NGVK+ YSIPKEG+ +WFD++A+P DA   K  +A++NYLL P+V+A +S  V 
Sbjct: 246 RAKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPKEAHAFINYLLDPQVIAKVSASVG 305

Query: 303 YANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIK 356
           YAN N  A   +DP +  N  +YPS +V+ KLY          R+ TR W+ +K
Sbjct: 306 YANANPAAKAFMDPELVNNPEVYPSQDVLDKLYISTTPTPATMRLMTRAWSKVK 359