Pairwise Alignments

Query, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  426 bits (1095), Expect = e-124
 Identities = 200/352 (56%), Positives = 263/352 (74%), Gaps = 2/352 (0%)

Query: 7   APLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLMTGN 66
           A L LA SV  AA TV  YNWS Y+ P TL +F++A+GI P  DV+DSNETL+GKL+ GN
Sbjct: 14  AGLTLACSV-QAAPTVHFYNWSDYIGPTTLADFEKATGIKPVQDVFDSNETLEGKLLAGN 72

Query: 67  SGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPYLWG 126
           +GYDVV PSNHF+ +QI+  A ++LDK+ LPN+ NL+P L+K LE NDPGNQY  PYLWG
Sbjct: 73  TGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDPGNQYAVPYLWG 132

Query: 127 STGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHYLGL 186
           + GIGYN+DKVKA LG +  +DSW ++F+PE M KL  CGVA LD+  E+LP  L+Y+GL
Sbjct: 133 TNGIGYNVDKVKAALGVDT-IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGL 191

Query: 187 PHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNRADE 246
             +S DPKDY KA+  L+ VRPY++YFHSSKY  DLANGDICV  GFSGDV QAK RA+E
Sbjct: 192 NPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEE 251

Query: 247 ANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQYANG 306
           A  GV + Y+IPKEG  +WFD++A+P DA + K  +A++NYLL+PEV+A +S++V YAN 
Sbjct: 252 AKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSDYVGYANP 311

Query: 307 NLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358
           N KA  L+D A++ +  +YP  EV+ K++    +P K+ R+ TR WT +K+G
Sbjct: 312 NPKAGALMDQAVRTDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSG 363