Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  377 bits (969), Expect = e-110
 Identities = 193/235 (82%), Positives = 212/235 (90%)

Query: 11  VAKRYGKGLLGWAAVLVILALLVHWIGIDTIARYRDDLGFYLQAHLVLVLASMAAALAVG 70
           +A RYGKGL+G A V+ +LALLVHWIGI+TI  YRDDL FYLQAHL+LVL SM AAL VG
Sbjct: 1   MAIRYGKGLIGGAVVVALLALLVHWIGINTIELYRDDLLFYLQAHLILVLVSMLAALVVG 60

Query: 71  IPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLASLLP 130
           IPAGI LSRP+ V +AERFMQ FN+GNT+PPLAVLAIAL +LGIG+GPAIFALFLASLLP
Sbjct: 61  IPAGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIGSGPAIFALFLASLLP 120

Query: 131 IVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAPL 190
           IVRNTYEGLKNV  SLKEAA GIGMTPRQ L++VELPNAVPII+GGVRVALA+NVGTAPL
Sbjct: 121 IVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIGGVRVALAINVGTAPL 180

Query: 191 AFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAVSFSSRRWLERGL 245
           AFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLAL+LD  V+ +SR WLERGL
Sbjct: 181 AFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGLVTMASRLWLERGL 235