Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 18/220 (8%)

Query: 24  AVLVILALLVHWIG------IDTIARYRD--DLGFYLQAH--LVLVLASMAAALAVGIPA 73
           A++ ++ALL H+I       +  IA +    +LG++ +    L  VL +    + +G+P 
Sbjct: 53  ALIGLIALLAHFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPL 112

Query: 74  GIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLASLLPIVR 133
           GI  +  H+           ++  T+P    L   L++ G+G  P + +  + ++   +R
Sbjct: 113 GIVAA--HKPMFYTMMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIR 170

Query: 134 NTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAPLAFL 193
            TY G+++VP  L +A    G + RQ L ++ELP+A+P I  G+   + L++    +A L
Sbjct: 171 LTYLGIRDVPQELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAAL 230

Query: 194 IGANSLGSLIFPGIALNNQPQLLLG---AACTALLALVLD 230
           +GA+ LG    P +   N   + LG        LLA++LD
Sbjct: 231 VGADGLGK---PVVNALNTADIALGFEAGLAIVLLAIMLD 267