Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 12/207 (5%)

Query: 24  AVLVILALLVHWIGIDTIARYRDDLGFYLQAHLVLVLASMAAALAVGIPAGIALSRPHRV 83
           AV+V L  LV  +G          L   L   L L++ +   ++ +G+P GI  +R +R+
Sbjct: 74  AVIVGLLFLVGAVG----------LWDKLMQTLALMMVATVISVLIGVPLGILSARSNRL 123

Query: 84  DKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLASLLPIVRNTYEGLKNVP 143
                 M   ++  T+P    L   L + G+G  PAIFA  + +  P++R T  G++ V 
Sbjct: 124 RSV--LMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVD 181

Query: 144 ASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAPLAFLIGANSLGSLI 203
             + EA    G    QQL+ V+LP A+P I+ G+     + +    +A +IGA  LG  +
Sbjct: 182 GEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDV 241

Query: 204 FPGIALNNQPQLLLGAACTALLALVLD 230
             GI   N  + L       +LA+V+D
Sbjct: 242 LVGIQTLNVGRGLEAGLAIVILAVVID 268