Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 11/197 (5%)

Query: 56  LVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQ-FFNVGNTIPPLAVLAIALSILGI 114
           L LVL S+   + +G+P G+ L+     D+A+R M+   +   T P    L   + + GI
Sbjct: 167 LSLVLTSLVFCMVIGLPLGVLLASS---DRAQRIMRPVLDAMQTTPAFVYLVPVVMLFGI 223

Query: 115 GAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIV 174
           G  P +    + +L P+VR T  GL+ V   L EAA   G +P Q L +V+LP A+P I+
Sbjct: 224 GNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIM 283

Query: 175 GGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLDAAVS 234
            G+  AL L++    +A +I    LG ++  GI   +     +G     LLA+ LD    
Sbjct: 284 AGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRLTQ 343

Query: 235 -------FSSRRWLERG 244
                     RRW   G
Sbjct: 344 AMGKSRRAGGRRWWHTG 360