Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 20/221 (9%)

Query: 18  GLLGW--------AAVLVILALLVHWIGIDTIARYRDDLGFYLQAHLVLVLASMAAALAV 69
           GLL W        +AVLV L  L+  +G          L   L   L LVL S    + V
Sbjct: 63  GLLAWHASRSLLRSAVLVALLALIGMLG----------LWDKLLQTLALVLVSTGLCVLV 112

Query: 70  GIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAGPAIFALFLASLL 129
           G+P GI L+   R       +   +V  T+P    L   L + G+G  PA+FA  + +L 
Sbjct: 113 GVPLGILLAA--RPLARRLLLPVLDVMQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALP 170

Query: 130 PIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVRVALALNVGTAP 189
           P+VR T  GL  +  SL +AA G+G +  Q+L ++ LP A+P I+ G+  ++ + +    
Sbjct: 171 PLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVV 230

Query: 190 LAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD 230
           +A +IGA  LG  +  GI   N  Q +        LA+V+D
Sbjct: 231 VASMIGARGLGEDVLAGIQTLNVGQGMEAGLAIVALAMVID 271