Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 278 a.a., proline/glycine betaine ABC transporter permease from Dickeya dianthicola ME23

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 3/189 (1%)

Query: 56  LVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIG 115
           L L L+S   +L +GIP GI  +R   V    R +  F    T+P    L  A  + G+G
Sbjct: 92  LALTLSSTFFSLLIGIPLGIWSARRATVGSIVRTLLDFM--QTMPAFVYLIPATILFGLG 149

Query: 116 AGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVG 175
             P IFA  L S+ P+VR T  G++ V  +  EA    G TP Q LW+V+LP A P I+ 
Sbjct: 150 RPPGIFATILFSMPPVVRLTDLGIRQVNVARLEAGIAFGCTPWQLLWKVQLPAAQPSIMA 209

Query: 176 GVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD-AAVS 234
           G+   + + +    +A ++GA  LG+ I   I        L       L+A++LD  + S
Sbjct: 210 GINQTIMMAMSMVIIASMVGAGGLGNDILSSIQQLEIGLGLQSGLVVVLMAILLDRLSAS 269

Query: 235 FSSRRWLER 243
           F+ RR  +R
Sbjct: 270 FAHRRHQQR 278