Pairwise Alignments

Query, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 2/175 (1%)

Query: 56  LVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIG 115
           L L+  ++  +  +GIP GI  +  + V +  R     ++  T P    L   + + G+G
Sbjct: 97  LSLISTAIVISTVIGIPVGIWCAINNSVWQVVR--PVLDIMQTTPTFVYLVPVVMLFGVG 154

Query: 116 AGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVG 175
             P   A+ +A+  P++R T  G++ V   + EA    G   RQ LW+++ P A+P I+G
Sbjct: 155 TVPGEVAVVIAAAPPLIRFTNLGIRMVETEMVEAGLAFGADRRQLLWEIQFPLAIPTILG 214

Query: 176 GVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALVLD 230
           G+   +   +  + +  +IGA  LG ++  G+   +  +  +G     LLA++LD
Sbjct: 215 GLNQTVLTAMVMSVVVAMIGAEGLGLVVLQGLGRLDVGRAAVGGIAIILLAMILD 269